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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870881.1_cds_XP_016434263.1_30339
CDS Infomation

[gene=LOC107760686] [db_xref=GeneID:107760686] [protein=beta-galactosidase 16-like] [protein_id=XP_016434263.1] [location=join(22452..22631,23178..23273,23407..23519,23642..23708,23832..23924,26452..26595,27016..27110,27193..27301,27440..27524,27595..27713,27889..28053,28302..28483,28671..28765,29430..29539,29951..30055,30311..30412,30610..30755,31515..31640,32502..32511)] [gbkey=CDS]
Sequence

ATGAAAATGCAGTGGCTATGGCGGAATTGGTTGGCAGCAGCGGCAGTACTATTGGCGGCG
GCGGCGGCGGCGTCTGCTGGCGGCGGAAATGTGAGTTATGACGGAAGGTCGTTGATAATT
GATGGGCAAAGAAAGATGTTGTTTTCTGGTTCTATTCATTATCCTCGAAGCACTCCTGAT
ATGTGGTCATCTCTAATATCAAAAGCTAAAGAAGGTGGGATAGATGTGATTGAGACCTAT
GTATTTTGGAACCTTCACGAACCCCAACCTGGACAGTACGATTTCAGCGGAAGGCGTAAC
ATAGTAGCATTTATTAAGCAAATTCAAGCACAAGGTCTCTATGCATGTCTTCGCATTGGG
CCCTACGTTGAGGGCGAATGGACTTACGGAGGTTTTCCCTTTTGGTTACATGATGTCCCT
GGCATTGTCTTTCGCTCAAATAATGAACCCTTCAAGTTCTACATGCAAAACTTCACTACA
AAAATAGTGAACCTAATGAAATCAGAAGGATTGTATGCTTCGCAAGGAGGTCCAATCATA
CTCTCCCAGATTGAGAATGAATATCAAAATGTAGAAAAAGCATTCGGAGAAAATGGCCCA
CCTTATGTCCTTTGGGCGGCAGAAATGGCAGTGGGACTTCAAACTGGGGTGCCATGGTGC
ATGTGCAAGCAAGATGATGCTCCTGATCCTGTTATTAATGCATGCAATGGGTTGAGATGT
GGAGAAACATTTGTAGGACCTAATTCACCCAACAAGCCATCAACCTGGACAGAGAACTGG
ACAAGCTTCTATCAAGTCTATGGTCAGAATGCAACACTCAGATCAGCAGAAGACATTGCA
TATCATGTTGCCCTGTTCATTGCAAGGAAGAATGGAACCTTCATAAACTATTACATGTAT
CATGGAGGAACCAATTTTGGCAGGACTGCTGCTGAATTTATGATAACAAGTTACTATGAT
CAAGCTCCGTTAGATGAGTACGGTTTAATCAGACAACCAAAATGGGGACATCTGAAAGAA
TTGCATGCTGCGGTTAAGTTATGCTCAGAGACCATACTTTCTGTATTCCCCTCCATGCAG
TCTTTAGGTGAACAACAAGAGGCTTATGTATTCAGTGGAGATTCTGGAGCTTGTGCAGCA
TTTCTAGTGAACATAGATAACACAAAAAGTGTACTAGTGCAGTTTCAAAATTCGTCATAT
GAGTTACCTCGGCAATCTATAAGCATCTTACCTGACTGCAAGACTGTATCCTTCAATACA
GCAAAGGTAAGCAGACCATTTAACACAAGAACAGCAATACCCGCCGTTAAGTTTGATTCA
GCTGAGAAATGGGAACAATTTCAAGAGGTTATTCCACAACTTGATGCTACTTCAATGAGA
TCAGACATATTACTGGAGCACATGAATACTGCAAAGGATGTATCTGATTATCTTTGGTAC
ACTTCCAGTATCCAGCAGGATTCGCCGGACCAGCAGTCAGTTACACTAAGTGTGAAGTCC
TTAGGCCATGTTTTACATGCTTTTGTGAATGGAGCACATGCAGGTTCTGCACATGGACAA
TTCAGAAATACATCATTTACTTTAGAGAGCACTATTTCTCTAAATAAAGGCACAAACAAC
ATCTCATTACTAAGTGCAACTGTTGGCTTACCGGATTCAGGATCATTTCTTGAACATAGG
GCTCTTGGTGTACAGTCCGTAATTATTCAAGACAGCGATGAGGCCAAAAATATCACCAAT
TACTCATGGGGTTATCAGGTTGGATTACTGGGGGAGAAGTTACAAATTTACTCATCAGAA
GGATCAAAGAGTGCTAATTGGAGCAGCTTAGGCTCTTCTCAACCGCTCACATGGTACAAG
TCAGCTTTTGATGCACCCGAGGGTGATGATCCTGTTGCATTAAACCTTGGCTCCATGGGA
AAAGGTGAAGCTTGGGTTAATGGTCAAAGCATCGGCCGATATTGGGTCTCATTTCGAACA
CTTGCAGGCATTCCGTCACAAACTTGGTACAATGTTCCAAGATCATTTCTCCAACCAGAG
GACAACTTATTAGTCTTATTCGAGGAGGAAACAGGCAACCCTCTTGACATCACTGTAGAT
ACTATTTCAGTCACAAAGCCGTCATTGAGAAAGCTTGTCTAG

Peptide Sequence

PEP ID

XP_016434263.1
PEP Infomation

PREDICTED: beta-galactosidase 16-like [Nicotiana tabacum]
Sequence

MKMQWLWRNWLAAAAVLLAAAAAASAGGGNVSYDGRSLIIDGQRKMLFSGSIHYPRSTPD
MWSSLISKAKEGGIDVIETYVFWNLHEPQPGQYDFSGRRNIVAFIKQIQAQGLYACLRIG
PYVEGEWTYGGFPFWLHDVPGIVFRSNNEPFKFYMQNFTTKIVNLMKSEGLYASQGGPII
LSQIENEYQNVEKAFGENGPPYVLWAAEMAVGLQTGVPWCMCKQDDAPDPVINACNGLRC
GETFVGPNSPNKPSTWTENWTSFYQVYGQNATLRSAEDIAYHVALFIARKNGTFINYYMY
HGGTNFGRTAAEFMITSYYDQAPLDEYGLIRQPKWGHLKELHAAVKLCSETILSVFPSMQ
SLGEQQEAYVFSGDSGACAAFLVNIDNTKSVLVQFQNSSYELPRQSISILPDCKTVSFNT
AKVSRPFNTRTAIPAVKFDSAEKWEQFQEVIPQLDATSMRSDILLEHMNTAKDVSDYLWY
TSSIQQDSPDQQSVTLSVKSLGHVLHAFVNGAHAGSAHGQFRNTSFTLESTISLNKGTNN
ISLLSATVGLPDSGSFLEHRALGVQSVIIQDSDEAKNITNYSWGYQVGLLGEKLQIYSSE
GSKSANWSSLGSSQPLTWYKSAFDAPEGDDPVALNLGSMGKGEAWVNGQSIGRYWVSFRT
LAGIPSQTWYNVPRSFLQPEDNLLVLFEEETGNPLDITVDTISVTKPSLRKLV

Transcript Sequence

Gene sequence data has not been registered.